Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxc5P32043 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.42□□□□□ -0.58
Hoxc5P32043 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.42□□□□□ -0.58
Hoxc5P32043 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.42□□□□□ -0.58
Hoxc5P32043 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Gm7809-201ENSMUST00000153199 742 ntBASIC11.42□□□□□ -0.58
Hoxc5P32043 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hoxc5P32043 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc5P32043 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.41□□□□□ -0.58
Hoxc5P32043 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.41□□□□□ -0.58
Hoxc5P32043 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Hoxc5P32043 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Hoxc5P32043 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.41□□□□□ -0.58
Hoxc5P32043 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Hoxc5P32043 Gm13492-201ENSMUST00000119772 665 ntBASIC11.41□□□□□ -0.58
Hoxc5P32043 Gm25927-201ENSMUST00000175058 117 ntBASIC11.41□□□□□ -0.58
Hoxc5P32043 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.41□□□□□ -0.58
Hoxc5P32043 Gm18584-201ENSMUST00000203098 964 ntBASIC11.41□□□□□ -0.58
Hoxc5P32043 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.41□□□□□ -0.58
Hoxc5P32043 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.41□□□□□ -0.58
Hoxc5P32043 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hoxc5P32043 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Hoxc5P32043 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.41□□□□□ -0.58
Hoxc5P32043 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.41□□□□□ -0.58
Hoxc5P32043 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.41□□□□□ -0.58
Hoxc5P32043 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hoxc5P32043 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hoxc5P32043 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hoxc5P32043 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.41□□□□□ -0.58
Hoxc5P32043 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.41□□□□□ -0.58
Hoxc5P32043 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hoxc5P32043 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Hoxc5P32043 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc5P32043 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxc5P32043 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc5P32043 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc5P32043 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc5P32043 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc5P32043 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc5P32043 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc5P32043 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc5P32043 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms