Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cd28P31041 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd28P31041 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd28P31041 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cd28P31041 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cd28P31041 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.82□□□□□ -0.68
Cd28P31041 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.82□□□□□ -0.68
Cd28P31041 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.82□□□□□ -0.68
Cd28P31041 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cd28P31041 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd28P31041 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cd28P31041 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd28P31041 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cd28P31041 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.82□□□□□ -0.68
Cd28P31041 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cd28P31041 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.81□□□□□ -0.68
Cd28P31041 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.81□□□□□ -0.68
Cd28P31041 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cd28P31041 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Gm8805-201ENSMUST00000117848 313 ntBASIC10.81□□□□□ -0.68
Cd28P31041 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.81□□□□□ -0.68
Cd28P31041 Gm16479-201ENSMUST00000121706 932 ntBASIC10.81□□□□□ -0.68
Cd28P31041 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.81□□□□□ -0.68
Cd28P31041 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.81□□□□□ -0.68
Cd28P31041 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.81□□□□□ -0.68
Cd28P31041 Rmrp-201ENSMUST00000157463 271 ntBASIC10.81□□□□□ -0.68
Cd28P31041 Gm17208-201ENSMUST00000168388 535 ntBASIC10.81□□□□□ -0.68
Cd28P31041 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cd28P31041 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cd28P31041 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.81□□□□□ -0.68
Cd28P31041 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.81□□□□□ -0.68
Cd28P31041 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cd28P31041 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cd28P31041 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cd28P31041 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.81□□□□□ -0.68
Cd28P31041 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd28P31041 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.8□□□□□ -0.68
Cd28P31041 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.8□□□□□ -0.68
Cd28P31041 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Cd28P31041 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.8□□□□□ -0.68
Cd28P31041 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.8□□□□□ -0.68
Cd28P31041 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Cd28P31041 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.8□□□□□ -0.68
Cd28P31041 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.8□□□□□ -0.68
Cd28P31041 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.8□□□□□ -0.68
Cd28P31041 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd28P31041 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms