Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RxrbP28704 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RxrbP28704 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.35□□□□□ -0.43
RxrbP28704 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RxrbP28704 Gm12091-201ENSMUST00000146791 830 ntBASIC12.35□□□□□ -0.43
RxrbP28704 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.35□□□□□ -0.43
RxrbP28704 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RxrbP28704 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RxrbP28704 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.35□□□□□ -0.43
RxrbP28704 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.35□□□□□ -0.43
RxrbP28704 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.35□□□□□ -0.43
RxrbP28704 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.35□□□□□ -0.43
RxrbP28704 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.35□□□□□ -0.43
RxrbP28704 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Gm8420-201ENSMUST00000097103 598 ntBASIC12.35□□□□□ -0.43
RxrbP28704 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RxrbP28704 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.35□□□□□ -0.43
RxrbP28704 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
RxrbP28704 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RxrbP28704 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RxrbP28704 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.35□□□□□ -0.43
RxrbP28704 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RxrbP28704 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RxrbP28704 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RxrbP28704 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.34□□□□□ -0.43
RxrbP28704 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.34□□□□□ -0.43
RxrbP28704 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Gm11918-201ENSMUST00000121660 179 ntBASIC12.34□□□□□ -0.43
RxrbP28704 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.34□□□□□ -0.43
RxrbP28704 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.34□□□□□ -0.43
RxrbP28704 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.34□□□□□ -0.43
RxrbP28704 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.34□□□□□ -0.43
RxrbP28704 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.34□□□□□ -0.43
RxrbP28704 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.34□□□□□ -0.43
RxrbP28704 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
RxrbP28704 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RxrbP28704 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.34□□□□□ -0.43
RxrbP28704 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.34□□□□□ -0.43
RxrbP28704 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.34□□□□□ -0.43
RxrbP28704 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RxrbP28704 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.34□□□□□ -0.43
RxrbP28704 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RxrbP28704 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.34□□□□□ -0.43
RxrbP28704 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RxrbP28704 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
RxrbP28704 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
RxrbP28704 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.33□□□□□ -0.43
RxrbP28704 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.33□□□□□ -0.43
RxrbP28704 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
RxrbP28704 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.33□□□□□ -0.44
RxrbP28704 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RxrbP28704 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.33□□□□□ -0.44
RxrbP28704 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.33□□□□□ -0.44
RxrbP28704 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms