Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Gm11964-201ENSMUST00000120982 444 ntBASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Gm16379-201ENSMUST00000161469 348 ntBASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Gm8738-201ENSMUST00000172606 329 ntBASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Gm25927-201ENSMUST00000175058 117 ntBASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Gm8762-201ENSMUST00000193486 339 ntBASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Gm44405-201ENSMUST00000198952 126 ntBASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Gm45930-201ENSMUST00000221330 292 ntBASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Daam2-202ENSMUST00000224595 1926 ntBASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1aP25118 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Paupar-201ENSMUST00000194826 3482 ntBASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Gm8018-201ENSMUST00000173536 789 ntBASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Gm9022-201ENSMUST00000182482 992 ntBASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Gm27731-201ENSMUST00000185192 107 ntBASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Gm24136-201ENSMUST00000083374 165 ntBASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf1aP25118 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf1aP25118 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf1aP25118 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf1aP25118 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms