Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Gm24590-201ENSMUST00000116699 119 ntBASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Gm26474-201ENSMUST00000116762 122 ntBASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Gm11858-201ENSMUST00000117935 838 ntBASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Gm14263-201ENSMUST00000117955 746 ntBASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Gm25116-201ENSMUST00000157191 122 ntBASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Gm3890-201ENSMUST00000182416 207 ntBASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Gm37751-201ENSMUST00000192440 1198 ntBASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Tnfrsf9P20334 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Tnfrsf9P20334 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms