Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.24□□□□□ -0.61
Hmgn1P18608 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Gm12363-201ENSMUST00000122250 668 ntBASIC11.24□□□□□ -0.61
Hmgn1P18608 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.24□□□□□ -0.61
Hmgn1P18608 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.24□□□□□ -0.61
Hmgn1P18608 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.24□□□□□ -0.61
Hmgn1P18608 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
Hmgn1P18608 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.24□□□□□ -0.61
Hmgn1P18608 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Hmgn1P18608 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn1P18608 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.23□□□□□ -0.61
Hmgn1P18608 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hmgn1P18608 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hmgn1P18608 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Gm7488-201ENSMUST00000117148 684 ntBASIC11.23□□□□□ -0.61
Hmgn1P18608 Gm9083-201ENSMUST00000120423 819 ntBASIC11.23□□□□□ -0.61
Hmgn1P18608 Gm11597-201ENSMUST00000121423 964 ntBASIC11.23□□□□□ -0.61
Hmgn1P18608 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.23□□□□□ -0.61
Hmgn1P18608 Gm18304-201ENSMUST00000189162 546 ntBASIC11.23□□□□□ -0.61
Hmgn1P18608 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.23□□□□□ -0.61
Hmgn1P18608 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.23□□□□□ -0.61
Hmgn1P18608 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.23□□□□□ -0.61
Hmgn1P18608 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Hmgn1P18608 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hmgn1P18608 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn1P18608 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms