Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.71□□□□□ -0.69
UbbP0CG49 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
UbbP0CG49 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
UbbP0CG49 Gm27331-201ENSMUST00000183705 60 ntBASIC10.71□□□□□ -0.69
UbbP0CG49 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.71□□□□□ -0.69
UbbP0CG49 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.71□□□□□ -0.69
UbbP0CG49 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.71□□□□□ -0.69
UbbP0CG49 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.71□□□□□ -0.69
UbbP0CG49 Gm4768-201ENSMUST00000206199 686 ntBASIC10.71□□□□□ -0.69
UbbP0CG49 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.71□□□□□ -0.69
UbbP0CG49 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
UbbP0CG49 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
UbbP0CG49 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
UbbP0CG49 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
UbbP0CG49 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
UbbP0CG49 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.7
UbbP0CG49 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
UbbP0CG49 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
UbbP0CG49 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
UbbP0CG49 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
UbbP0CG49 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
UbbP0CG49 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
UbbP0CG49 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.7□□□□□ -0.7
UbbP0CG49 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.7□□□□□ -0.7
UbbP0CG49 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.7□□□□□ -0.7
UbbP0CG49 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
UbbP0CG49 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.7□□□□□ -0.7
UbbP0CG49 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Snord83b-201ENSMUST00000104546 94 ntBASIC10.7□□□□□ -0.7
UbbP0CG49 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.7□□□□□ -0.7
UbbP0CG49 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.7□□□□□ -0.7
UbbP0CG49 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.7□□□□□ -0.7
UbbP0CG49 Mir6977-201ENSMUST00000184960 64 ntBASIC10.7□□□□□ -0.7
UbbP0CG49 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
UbbP0CG49 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.7□□□□□ -0.7
UbbP0CG49 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.7□□□□□ -0.7
UbbP0CG49 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.7□□□□□ -0.7
UbbP0CG49 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Gm24136-201ENSMUST00000083374 165 ntBASIC10.7□□□□□ -0.7
UbbP0CG49 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
UbbP0CG49 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
UbbP0CG49 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
UbbP0CG49 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UbbP0CG49 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
UbbP0CG49 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
UbbP0CG49 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
UbbP0CG49 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.7□□□□□ -0.7
UbbP0CG49 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
UbbP0CG49 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms