Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.04□□□□□ -0.32
TnfP06804 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.04□□□□□ -0.32
TnfP06804 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.04□□□□□ -0.32
TnfP06804 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.04□□□□□ -0.32
TnfP06804 Gm12566-201ENSMUST00000121479 359 ntBASIC13.04□□□□□ -0.32
TnfP06804 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.04□□□□□ -0.32
TnfP06804 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.04□□□□□ -0.32
TnfP06804 Mir6979-201ENSMUST00000183927 56 ntBASIC13.04□□□□□ -0.32
TnfP06804 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.04□□□□□ -0.32
TnfP06804 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.04□□□□□ -0.32
TnfP06804 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.04□□□□□ -0.32
TnfP06804 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TnfP06804 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.04□□□□□ -0.32
TnfP06804 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.04□□□□□ -0.32
TnfP06804 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.04□□□□□ -0.32
TnfP06804 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.03□□□□□ -0.32
TnfP06804 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.03□□□□□ -0.32
TnfP06804 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
TnfP06804 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
TnfP06804 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TnfP06804 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.03□□□□□ -0.32
TnfP06804 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.03□□□□□ -0.32
TnfP06804 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.03□□□□□ -0.32
TnfP06804 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.03□□□□□ -0.32
TnfP06804 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.03□□□□□ -0.32
TnfP06804 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.03□□□□□ -0.32
TnfP06804 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
TnfP06804 Gm17827-201ENSMUST00000211825 742 ntBASIC13.03□□□□□ -0.32
TnfP06804 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.03□□□□□ -0.32
TnfP06804 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.03□□□□□ -0.32
TnfP06804 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TnfP06804 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
TnfP06804 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
TnfP06804 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TnfP06804 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TnfP06804 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TnfP06804 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TnfP06804 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.03□□□□□ -0.32
TnfP06804 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.02□□□□□ -0.32
TnfP06804 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TnfP06804 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
TnfP06804 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TnfP06804 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
TnfP06804 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.02□□□□□ -0.32
TnfP06804 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
TnfP06804 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TnfP06804 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TnfP06804 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.02□□□□□ -0.32
TnfP06804 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TnfP06804 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TnfP06804 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.02□□□□□ -0.33
TnfP06804 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TnfP06804 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.02□□□□□ -0.33
TnfP06804 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.02□□□□□ -0.33
TnfP06804 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TnfP06804 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TnfP06804 AU022133-201ENSMUST00000200601 873 ntBASIC13.02□□□□□ -0.33
TnfP06804 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TnfP06804 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.02□□□□□ -0.33
TnfP06804 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.02□□□□□ -0.33
TnfP06804 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.02□□□□□ -0.33
TnfP06804 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.02□□□□□ -0.33
TnfP06804 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TnfP06804 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TnfP06804 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.02□□□□□ -0.33
TnfP06804 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TnfP06804 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms