Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.72□□□□□ -0.37
PrnpP04925 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
PrnpP04925 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Gm12164-201ENSMUST00000121695 551 ntBASIC12.72□□□□□ -0.37
PrnpP04925 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.72□□□□□ -0.37
PrnpP04925 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.72□□□□□ -0.37
PrnpP04925 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.72□□□□□ -0.37
PrnpP04925 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PrnpP04925 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.72□□□□□ -0.37
PrnpP04925 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.72□□□□□ -0.37
PrnpP04925 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Gm17831-201ENSMUST00000205579 900 ntBASIC12.72□□□□□ -0.37
PrnpP04925 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.72□□□□□ -0.37
PrnpP04925 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
PrnpP04925 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.72□□□□□ -0.37
PrnpP04925 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
PrnpP04925 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.72□□□□□ -0.37
PrnpP04925 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.72□□□□□ -0.37
PrnpP04925 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.72□□□□□ -0.37
PrnpP04925 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.72□□□□□ -0.37
PrnpP04925 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.71□□□□□ -0.37
PrnpP04925 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PrnpP04925 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PrnpP04925 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PrnpP04925 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.71□□□□□ -0.37
PrnpP04925 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.71□□□□□ -0.37
PrnpP04925 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PrnpP04925 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
PrnpP04925 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PrnpP04925 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
PrnpP04925 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
PrnpP04925 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
PrnpP04925 Gm11660-201ENSMUST00000120955 412 ntBASIC12.71□□□□□ -0.37
PrnpP04925 Gm13263-201ENSMUST00000121271 838 ntBASIC12.71□□□□□ -0.37
PrnpP04925 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
PrnpP04925 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
PrnpP04925 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.71□□□□□ -0.37
PrnpP04925 Gm8365-201ENSMUST00000197334 648 ntBASIC12.71□□□□□ -0.37
PrnpP04925 Gm44882-201ENSMUST00000205702 802 ntBASIC12.71□□□□□ -0.37
PrnpP04925 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
PrnpP04925 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PrnpP04925 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.71□□□□□ -0.37
PrnpP04925 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.71□□□□□ -0.37
PrnpP04925 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.71□□□□□ -0.37
PrnpP04925 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.71□□□□□ -0.37
PrnpP04925 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
PrnpP04925 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PrnpP04925 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PrnpP04925 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.71□□□□□ -0.37
PrnpP04925 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PrnpP04925 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
PrnpP04925 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PrnpP04925 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
PrnpP04925 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PrnpP04925 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
PrnpP04925 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
PrnpP04925 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
PrnpP04925 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PrnpP04925 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PrnpP04925 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PrnpP04925 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
PrnpP04925 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PrnpP04925 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PrnpP04925 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PrnpP04925 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.7□□□□□ -0.38
PrnpP04925 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PrnpP04925 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PrnpP04925 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PrnpP04925 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PrnpP04925 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
PrnpP04925 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PrnpP04925 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PrnpP04925 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PrnpP04925 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
PrnpP04925 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
PrnpP04925 Gm11628-201ENSMUST00000117568 171 ntBASIC12.7□□□□□ -0.38
PrnpP04925 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.7□□□□□ -0.38
PrnpP04925 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PrnpP04925 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.7□□□□□ -0.38
PrnpP04925 Gm22144-201ENSMUST00000157402 102 ntBASIC12.7□□□□□ -0.38
PrnpP04925 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.7□□□□□ -0.38
PrnpP04925 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
PrnpP04925 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.7□□□□□ -0.38
PrnpP04925 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.7□□□□□ -0.38
PrnpP04925 Gm9540-201ENSMUST00000188230 478 ntBASIC12.7□□□□□ -0.38
PrnpP04925 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.7□□□□□ -0.38
PrnpP04925 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.7□□□□□ -0.38
PrnpP04925 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms