Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.82□□□□□ -0.68
P04224 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.82□□□□□ -0.68
P04224 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.82□□□□□ -0.68
P04224 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
P04224 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
P04224 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.82□□□□□ -0.68
P04224 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.81□□□□□ -0.68
P04224 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
P04224 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.81□□□□□ -0.68
P04224 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Gm15371-201ENSMUST00000117057 784 ntBASIC10.81□□□□□ -0.68
P04224 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
P04224 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Gm7730-201ENSMUST00000212486 454 ntBASIC10.81□□□□□ -0.68
P04224 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
P04224 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
P04224 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
P04224 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.81□□□□□ -0.68
P04224 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.81□□□□□ -0.68
P04224 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P04224 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.8□□□□□ -0.68
P04224 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.8□□□□□ -0.68
P04224 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
P04224 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.8□□□□□ -0.68
P04224 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.8□□□□□ -0.68
P04224 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
P04224 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
P04224 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
P04224 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.8□□□□□ -0.68
P04224 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.8□□□□□ -0.68
P04224 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.8□□□□□ -0.68
P04224 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.8□□□□□ -0.68
P04224 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.8□□□□□ -0.68
P04224 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.8□□□□□ -0.68
P04224 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.8□□□□□ -0.68
P04224 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.8□□□□□ -0.68
P04224 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
P04224 Btrc-209ENSMUST00000224478 2194 ntBASIC10.8□□□□□ -0.68
P04224 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
P04224 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms