Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.32□□□□□ -0.28
Vti1aO89116 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vti1aO89116 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Vti1aO89116 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vti1aO89116 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vti1aO89116 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Gm14263-201ENSMUST00000117955 746 ntBASIC13.31□□□□□ -0.28
Vti1aO89116 Gm13996-201ENSMUST00000118456 430 ntBASIC13.31□□□□□ -0.28
Vti1aO89116 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.31□□□□□ -0.28
Vti1aO89116 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vti1aO89116 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.31□□□□□ -0.28
Vti1aO89116 Gm45224-201ENSMUST00000208203 414 ntBASIC13.31□□□□□ -0.28
Vti1aO89116 Gm45433-201ENSMUST00000209386 247 ntBASIC13.31□□□□□ -0.28
Vti1aO89116 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.31□□□□□ -0.28
Vti1aO89116 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.31□□□□□ -0.28
Vti1aO89116 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vti1aO89116 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vti1aO89116 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1aO89116 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.3□□□□□ -0.28
Vti1aO89116 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.3□□□□□ -0.28
Vti1aO89116 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.3□□□□□ -0.28
Vti1aO89116 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vti1aO89116 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vti1aO89116 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Vti1aO89116 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.3□□□□□ -0.28
Vti1aO89116 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.3□□□□□ -0.28
Vti1aO89116 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vti1aO89116 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.3□□□□□ -0.28
Vti1aO89116 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.3□□□□□ -0.28
Vti1aO89116 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Rprl1-202ENSMUST00000198476 238 ntBASIC13.3□□□□□ -0.28
Vti1aO89116 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.3□□□□□ -0.28
Vti1aO89116 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.3□□□□□ -0.28
Vti1aO89116 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.3□□□□□ -0.28
Vti1aO89116 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Vti1aO89116 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vti1aO89116 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1aO89116 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vti1aO89116 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vti1aO89116 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms