Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm24830-201ENSMUST00000102024 166 ntBASIC12.1□□□□□ -0.47
ClppO88696 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.1□□□□□ -0.47
ClppO88696 Gm11930-201ENSMUST00000117788 190 ntBASIC12.1□□□□□ -0.47
ClppO88696 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
ClppO88696 Gm25890-201ENSMUST00000177643 165 ntBASIC12.1□□□□□ -0.47
ClppO88696 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.1□□□□□ -0.47
ClppO88696 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.1□□□□□ -0.47
ClppO88696 Gm22614-201ENSMUST00000178300 165 ntBASIC12.1□□□□□ -0.47
ClppO88696 Gm2546-201ENSMUST00000182630 991 ntBASIC12.1□□□□□ -0.47
ClppO88696 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.1□□□□□ -0.47
ClppO88696 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.1□□□□□ -0.47
ClppO88696 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.1□□□□□ -0.47
ClppO88696 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.1□□□□□ -0.47
ClppO88696 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.1□□□□□ -0.47
ClppO88696 Gm38092-201ENSMUST00000195600 653 ntBASIC12.1□□□□□ -0.47
ClppO88696 Gm37466-201ENSMUST00000195692 652 ntBASIC12.1□□□□□ -0.47
ClppO88696 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.1□□□□□ -0.47
ClppO88696 Gm45925-201ENSMUST00000218882 744 ntBASIC12.1□□□□□ -0.47
ClppO88696 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
ClppO88696 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
ClppO88696 Gm22042-201ENSMUST00000082989 165 ntBASIC12.1□□□□□ -0.47
ClppO88696 Gm26232-201ENSMUST00000083360 166 ntBASIC12.1□□□□□ -0.47
ClppO88696 Gm24136-201ENSMUST00000083374 165 ntBASIC12.1□□□□□ -0.47
ClppO88696 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.1□□□□□ -0.47
ClppO88696 Gm26110-201ENSMUST00000083971 165 ntBASIC12.1□□□□□ -0.47
ClppO88696 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.1□□□□□ -0.47
ClppO88696 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
ClppO88696 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
ClppO88696 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.1□□□□□ -0.47
ClppO88696 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
ClppO88696 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.1□□□□□ -0.47
ClppO88696 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.09□□□□□ -0.47
ClppO88696 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.09□□□□□ -0.47
ClppO88696 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.09□□□□□ -0.47
ClppO88696 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.09□□□□□ -0.47
ClppO88696 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.09□□□□□ -0.47
ClppO88696 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.09□□□□□ -0.47
ClppO88696 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.09□□□□□ -0.47
ClppO88696 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.09□□□□□ -0.47
ClppO88696 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.09□□□□□ -0.47
ClppO88696 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ClppO88696 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.09□□□□□ -0.47
ClppO88696 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.09□□□□□ -0.47
ClppO88696 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClppO88696 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ClppO88696 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ClppO88696 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.08□□□□□ -0.48
ClppO88696 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
ClppO88696 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.08□□□□□ -0.48
ClppO88696 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms