Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.4□□□□□ -0.42
Chrna4O70174 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Chrna4O70174 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.4□□□□□ -0.42
Chrna4O70174 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.4□□□□□ -0.42
Chrna4O70174 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Chrna4O70174 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.4□□□□□ -0.42
Chrna4O70174 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.4□□□□□ -0.42
Chrna4O70174 Gm26956-201ENSMUST00000182176 986 ntBASIC12.4□□□□□ -0.42
Chrna4O70174 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.4□□□□□ -0.42
Chrna4O70174 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.4□□□□□ -0.42
Chrna4O70174 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.4□□□□□ -0.42
Chrna4O70174 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.4□□□□□ -0.42
Chrna4O70174 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.4□□□□□ -0.42
Chrna4O70174 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Chrna4O70174 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chrna4O70174 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chrna4O70174 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Chrna4O70174 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Chrna4O70174 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.4□□□□□ -0.43
Chrna4O70174 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Chrna4O70174 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.43
Chrna4O70174 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Chrna4O70174 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.39□□□□□ -0.43
Chrna4O70174 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Chrna4O70174 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.39□□□□□ -0.43
Chrna4O70174 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.39□□□□□ -0.43
Chrna4O70174 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.39□□□□□ -0.43
Chrna4O70174 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.39□□□□□ -0.43
Chrna4O70174 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Chrna4O70174 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.39□□□□□ -0.43
Chrna4O70174 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.39□□□□□ -0.43
Chrna4O70174 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.39□□□□□ -0.43
Chrna4O70174 Gm8712-201ENSMUST00000221090 701 ntBASIC12.39□□□□□ -0.43
Chrna4O70174 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.39□□□□□ -0.43
Chrna4O70174 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Gm9899-201ENSMUST00000065519 555 ntBASIC12.39□□□□□ -0.43
Chrna4O70174 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.39□□□□□ -0.43
Chrna4O70174 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Chrna4O70174 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Chrna4O70174 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.39□□□□□ -0.43
Chrna4O70174 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Chrna4O70174 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.39□□□□□ -0.43
Chrna4O70174 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.39□□□□□ -0.43
Chrna4O70174 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Chrna4O70174 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chrna4O70174 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Chrna4O70174 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms