Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.23□□□□□ -0.45
Ldb2O55203 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb2O55203 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb2O55203 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb2O55203 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb2O55203 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb2O55203 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb2O55203 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb2O55203 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb2O55203 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb2O55203 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb2O55203 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb2O55203 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ldb2O55203 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Ldb2O55203 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.22□□□□□ -0.45
Ldb2O55203 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.22□□□□□ -0.45
Ldb2O55203 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ldb2O55203 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.22□□□□□ -0.45
Ldb2O55203 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.22□□□□□ -0.45
Ldb2O55203 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.22□□□□□ -0.45
Ldb2O55203 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.22□□□□□ -0.45
Ldb2O55203 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.22□□□□□ -0.45
Ldb2O55203 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.22□□□□□ -0.45
Ldb2O55203 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.22□□□□□ -0.45
Ldb2O55203 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.22□□□□□ -0.45
Ldb2O55203 Gm38266-201ENSMUST00000194931 421 ntBASIC12.22□□□□□ -0.45
Ldb2O55203 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.22□□□□□ -0.45
Ldb2O55203 Gm21769-201ENSMUST00000211922 111 ntBASIC12.22□□□□□ -0.45
Ldb2O55203 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ldb2O55203 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.22□□□□□ -0.45
Ldb2O55203 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.22□□□□□ -0.45
Ldb2O55203 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Ldb2O55203 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Ldb2O55203 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ldb2O55203 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ldb2O55203 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ldb2O55203 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb2O55203 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.21□□□□□ -0.45
Ldb2O55203 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.21□□□□□ -0.45
Ldb2O55203 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.21□□□□□ -0.45
Ldb2O55203 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ldb2O55203 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.21□□□□□ -0.45
Ldb2O55203 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.21□□□□□ -0.45
Ldb2O55203 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.21□□□□□ -0.45
Ldb2O55203 Gm14723-201ENSMUST00000118686 215 ntBASIC12.21□□□□□ -0.45
Ldb2O55203 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
Ldb2O55203 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.21□□□□□ -0.45
Ldb2O55203 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Gm43822-201ENSMUST00000200285 476 ntBASIC12.21□□□□□ -0.45
Ldb2O55203 Gm45865-201ENSMUST00000211815 945 ntBASIC12.21□□□□□ -0.45
Ldb2O55203 Gm19994-201ENSMUST00000217086 586 ntBASIC12.21□□□□□ -0.45
Ldb2O55203 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.21□□□□□ -0.45
Ldb2O55203 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.21□□□□□ -0.45
Ldb2O55203 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.21□□□□□ -0.45
Ldb2O55203 Cts7-204ENSMUST00000225321 1257 ntBASIC12.21□□□□□ -0.45
Ldb2O55203 Gm9996-201ENSMUST00000070359 913 ntBASIC12.21□□□□□ -0.45
Ldb2O55203 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.21□□□□□ -0.45
Ldb2O55203 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb2O55203 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.21□□□□□ -0.46
Ldb2O55203 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ldb2O55203 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms