Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trdmt1O55055 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trdmt1O55055 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trdmt1O55055 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.53□□□□□ -0.24
Trdmt1O55055 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.53□□□□□ -0.24
Trdmt1O55055 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.53□□□□□ -0.24
Trdmt1O55055 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trdmt1O55055 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trdmt1O55055 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trdmt1O55055 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trdmt1O55055 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trdmt1O55055 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trdmt1O55055 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trdmt1O55055 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trdmt1O55055 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trdmt1O55055 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trdmt1O55055 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trdmt1O55055 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trdmt1O55055 Gm15595-201ENSMUST00000120840 961 ntBASIC13.52□□□□□ -0.25
Trdmt1O55055 Gm4726-201ENSMUST00000135604 736 ntBASIC13.52□□□□□ -0.25
Trdmt1O55055 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trdmt1O55055 Gm6019-201ENSMUST00000148369 736 ntBASIC13.52□□□□□ -0.25
Trdmt1O55055 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trdmt1O55055 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.52□□□□□ -0.25
Trdmt1O55055 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trdmt1O55055 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trdmt1O55055 Gm44882-201ENSMUST00000205702 802 ntBASIC13.52□□□□□ -0.25
Trdmt1O55055 Gm9463-201ENSMUST00000206707 601 ntBASIC13.52□□□□□ -0.25
Trdmt1O55055 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trdmt1O55055 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.52□□□□□ -0.25
Trdmt1O55055 Gm18041-201ENSMUST00000218210 618 ntBASIC13.52□□□□□ -0.25
Trdmt1O55055 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.52□□□□□ -0.25
Trdmt1O55055 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.52□□□□□ -0.25
Trdmt1O55055 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.52□□□□□ -0.25
Trdmt1O55055 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trdmt1O55055 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trdmt1O55055 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trdmt1O55055 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trdmt1O55055 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trdmt1O55055 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trdmt1O55055 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trdmt1O55055 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trdmt1O55055 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.51□□□□□ -0.25
Trdmt1O55055 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Gm5419-201ENSMUST00000119301 527 ntBASIC13.51□□□□□ -0.25
Trdmt1O55055 Gm11956-201ENSMUST00000119525 512 ntBASIC13.51□□□□□ -0.25
Trdmt1O55055 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.51□□□□□ -0.25
Trdmt1O55055 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Trdmt1O55055 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Gm45575-201ENSMUST00000210283 548 ntBASIC13.51□□□□□ -0.25
Trdmt1O55055 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.51□□□□□ -0.25
Trdmt1O55055 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.51□□□□□ -0.25
Trdmt1O55055 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trdmt1O55055 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trdmt1O55055 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trdmt1O55055 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trdmt1O55055 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trdmt1O55055 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trdmt1O55055 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trdmt1O55055 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trdmt1O55055 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trdmt1O55055 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trdmt1O55055 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trdmt1O55055 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trdmt1O55055 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms