Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.4□□□□□ -0.74
Cxcl13O55038 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.4□□□□□ -0.74
Cxcl13O55038 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.4□□□□□ -0.74
Cxcl13O55038 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Mir7677-201ENSMUST00000184226 67 ntBASIC10.4□□□□□ -0.74
Cxcl13O55038 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Gm43378-201ENSMUST00000199336 582 ntBASIC10.4□□□□□ -0.74
Cxcl13O55038 AU022133-201ENSMUST00000200601 873 ntBASIC10.4□□□□□ -0.74
Cxcl13O55038 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Gm44882-201ENSMUST00000205702 802 ntBASIC10.4□□□□□ -0.74
Cxcl13O55038 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.4□□□□□ -0.74
Cxcl13O55038 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Cxcl13O55038 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cxcl13O55038 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cxcl13O55038 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cxcl13O55038 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cxcl13O55038 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Cxcl13O55038 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.39□□□□□ -0.75
Cxcl13O55038 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.39□□□□□ -0.75
Cxcl13O55038 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.39□□□□□ -0.75
Cxcl13O55038 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cxcl13O55038 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cxcl13O55038 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.39□□□□□ -0.75
Cxcl13O55038 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cxcl13O55038 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Cxcl13O55038 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Gm7722-201ENSMUST00000120646 741 ntBASIC10.39□□□□□ -0.75
Cxcl13O55038 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.39□□□□□ -0.75
Cxcl13O55038 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.39□□□□□ -0.75
Cxcl13O55038 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Cxcl13O55038 Gm18734-201ENSMUST00000172937 808 ntBASIC10.39□□□□□ -0.75
Cxcl13O55038 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.39□□□□□ -0.75
Cxcl13O55038 Gm3786-201ENSMUST00000202659 378 ntBASIC10.39□□□□□ -0.75
Cxcl13O55038 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.39□□□□□ -0.75
Cxcl13O55038 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.39□□□□□ -0.75
Cxcl13O55038 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Cxcl13O55038 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cxcl13O55038 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cxcl13O55038 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.39□□□□□ -0.75
Cxcl13O55038 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cxcl13O55038 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.38□□□□□ -0.75
Cxcl13O55038 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cxcl13O55038 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Cxcl13O55038 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms