Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.14□□□□□ -0.15
Copb2O55029 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Copb2O55029 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.14□□□□□ -0.15
Copb2O55029 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.14□□□□□ -0.15
Copb2O55029 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.14□□□□□ -0.15
Copb2O55029 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Copb2O55029 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Copb2O55029 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Copb2O55029 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Copb2O55029 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Copb2O55029 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Copb2O55029 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Copb2O55029 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Copb2O55029 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.13□□□□□ -0.15
Copb2O55029 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.13□□□□□ -0.15
Copb2O55029 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.13□□□□□ -0.15
Copb2O55029 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.13□□□□□ -0.15
Copb2O55029 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Copb2O55029 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.13□□□□□ -0.15
Copb2O55029 Gm23949-201ENSMUST00000104027 127 ntBASIC14.13□□□□□ -0.15
Copb2O55029 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Copb2O55029 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Copb2O55029 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.13□□□□□ -0.15
Copb2O55029 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.13□□□□□ -0.15
Copb2O55029 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.13□□□□□ -0.15
Copb2O55029 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.13□□□□□ -0.15
Copb2O55029 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Copb2O55029 Gm5616-201ENSMUST00000165252 384 ntBASIC14.13□□□□□ -0.15
Copb2O55029 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Gm8741-201ENSMUST00000174736 384 ntBASIC14.13□□□□□ -0.15
Copb2O55029 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
Copb2O55029 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.13□□□□□ -0.15
Copb2O55029 AY036118-201ENSMUST00000200021 923 ntBASIC14.13□□□□□ -0.15
Copb2O55029 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.13□□□□□ -0.15
Copb2O55029 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Copb2O55029 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.13□□□□□ -0.15
Copb2O55029 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Copb2O55029 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.12□□□□□ -0.15
Copb2O55029 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.12□□□□□ -0.15
Copb2O55029 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC14.12□□□□□ -0.15
Copb2O55029 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Copb2O55029 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Copb2O55029 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.12□□□□□ -0.15
Copb2O55029 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.12□□□□□ -0.15
Copb2O55029 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Copb2O55029 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.12□□□□□ -0.15
Copb2O55029 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.12□□□□□ -0.15
Copb2O55029 Gm17040-202ENSMUST00000170597 889 ntBASIC14.12□□□□□ -0.15
Copb2O55029 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.12□□□□□ -0.15
Copb2O55029 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms