Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Limk2O54785 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Limk2O54785 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Limk2O54785 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Limk2O54785 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Limk2O54785 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.5□□□□□ -0.41
Limk2O54785 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.5□□□□□ -0.41
Limk2O54785 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Rubie-203ENSMUST00000227803 2430 ntBASIC12.5□□□□□ -0.41
Limk2O54785 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.5□□□□□ -0.41
Limk2O54785 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Limk2O54785 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Limk2O54785 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Limk2O54785 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Limk2O54785 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Gm7857-201ENSMUST00000117957 358 ntBASIC12.5□□□□□ -0.41
Limk2O54785 Gm14832-201ENSMUST00000121289 322 ntBASIC12.5□□□□□ -0.41
Limk2O54785 Gm24845-201ENSMUST00000158034 109 ntBASIC12.5□□□□□ -0.41
Limk2O54785 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.5□□□□□ -0.41
Limk2O54785 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.5□□□□□ -0.41
Limk2O54785 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Limk2O54785 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Limk2O54785 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.5□□□□□ -0.41
Limk2O54785 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Limk2O54785 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limk2O54785 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Limk2O54785 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Limk2O54785 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Limk2O54785 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Limk2O54785 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Limk2O54785 Gm24934-201ENSMUST00000103764 111 ntBASIC12.49□□□□□ -0.41
Limk2O54785 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Gm14109-201ENSMUST00000118814 309 ntBASIC12.49□□□□□ -0.41
Limk2O54785 Gm12217-201ENSMUST00000118858 696 ntBASIC12.49□□□□□ -0.41
Limk2O54785 Gm12566-201ENSMUST00000121479 359 ntBASIC12.49□□□□□ -0.41
Limk2O54785 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.49□□□□□ -0.41
Limk2O54785 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Limk2O54785 Gm26361-201ENSMUST00000158868 186 ntBASIC12.49□□□□□ -0.41
Limk2O54785 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.49□□□□□ -0.41
Limk2O54785 Mir6927-201ENSMUST00000184494 71 ntBASIC12.49□□□□□ -0.41
Limk2O54785 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.49□□□□□ -0.41
Limk2O54785 Gm42997-202ENSMUST00000200321 985 ntBASIC12.49□□□□□ -0.41
Limk2O54785 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.49□□□□□ -0.41
Limk2O54785 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Limk2O54785 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.49□□□□□ -0.41
Limk2O54785 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Limk2O54785 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Limk2O54785 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Limk2O54785 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.49□□□□□ -0.41
Limk2O54785 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Limk2O54785 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Limk2O54785 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Limk2O54785 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.48□□□□□ -0.41
Limk2O54785 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Limk2O54785 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Limk2O54785 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Limk2O54785 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.48□□□□□ -0.41
Limk2O54785 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms