Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Npc1O35604 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.03□□□□□ -0.48
Npc1O35604 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Npc1O35604 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.03□□□□□ -0.48
Npc1O35604 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Npc1O35604 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Npc1O35604 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Npc1O35604 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.02□□□□□ -0.48
Npc1O35604 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Npc1O35604 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.02□□□□□ -0.48
Npc1O35604 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Npc1O35604 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Npc1O35604 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Npc1O35604 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Npc1O35604 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Npc1O35604 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.02□□□□□ -0.49
Npc1O35604 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Gm24830-201ENSMUST00000102024 166 ntBASIC12.02□□□□□ -0.49
Npc1O35604 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Npc1O35604 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Npc1O35604 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Npc1O35604 Gm13665-201ENSMUST00000120830 528 ntBASIC12.02□□□□□ -0.49
Npc1O35604 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Npc1O35604 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Npc1O35604 Gm25890-201ENSMUST00000177643 165 ntBASIC12.02□□□□□ -0.49
Npc1O35604 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.02□□□□□ -0.49
Npc1O35604 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.02□□□□□ -0.49
Npc1O35604 Gm22614-201ENSMUST00000178300 165 ntBASIC12.02□□□□□ -0.49
Npc1O35604 Gm28882-201ENSMUST00000185504 314 ntBASIC12.02□□□□□ -0.49
Npc1O35604 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.02□□□□□ -0.49
Npc1O35604 Gm38317-201ENSMUST00000195564 343 ntBASIC12.02□□□□□ -0.49
Npc1O35604 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.02□□□□□ -0.49
Npc1O35604 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.02□□□□□ -0.49
Npc1O35604 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Npc1O35604 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Gm10312-201ENSMUST00000078515 489 ntBASIC12.02□□□□□ -0.49
Npc1O35604 Gm22042-201ENSMUST00000082989 165 ntBASIC12.02□□□□□ -0.49
Npc1O35604 Gm26232-201ENSMUST00000083360 166 ntBASIC12.02□□□□□ -0.49
Npc1O35604 Gm24136-201ENSMUST00000083374 165 ntBASIC12.02□□□□□ -0.49
Npc1O35604 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.02□□□□□ -0.49
Npc1O35604 Gm26110-201ENSMUST00000083971 165 ntBASIC12.02□□□□□ -0.49
Npc1O35604 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Npc1O35604 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Npc1O35604 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Npc1O35604 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.02□□□□□ -0.49
Npc1O35604 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Npc1O35604 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.01□□□□□ -0.49
Npc1O35604 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.01□□□□□ -0.49
Npc1O35604 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Npc1O35604 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.01□□□□□ -0.49
Npc1O35604 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Gm24231-201ENSMUST00000104315 133 ntBASIC12.01□□□□□ -0.49
Npc1O35604 Gm11597-201ENSMUST00000121423 964 ntBASIC12.01□□□□□ -0.49
Npc1O35604 Gm17376-201ENSMUST00000166016 84 ntBASIC12.01□□□□□ -0.49
Npc1O35604 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.01□□□□□ -0.49
Npc1O35604 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.01□□□□□ -0.49
Npc1O35604 Gm8885-201ENSMUST00000189382 598 ntBASIC12.01□□□□□ -0.49
Npc1O35604 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.01□□□□□ -0.49
Npc1O35604 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.01□□□□□ -0.49
Npc1O35604 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Npc1O35604 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms