Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hps1O08983 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.49□□□□□ -0.57
Hps1O08983 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.49□□□□□ -0.57
Hps1O08983 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hps1O08983 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.49□□□□□ -0.57
Hps1O08983 Gm15236-201ENSMUST00000117309 379 ntBASIC11.49□□□□□ -0.57
Hps1O08983 Gm13350-201ENSMUST00000120519 479 ntBASIC11.49□□□□□ -0.57
Hps1O08983 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.49□□□□□ -0.57
Hps1O08983 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.49□□□□□ -0.57
Hps1O08983 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
Hps1O08983 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hps1O08983 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hps1O08983 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.49□□□□□ -0.57
Hps1O08983 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.49□□□□□ -0.57
Hps1O08983 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.49□□□□□ -0.57
Hps1O08983 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hps1O08983 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.48□□□□□ -0.57
Hps1O08983 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.48□□□□□ -0.57
Hps1O08983 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hps1O08983 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hps1O08983 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hps1O08983 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.48□□□□□ -0.57
Hps1O08983 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hps1O08983 Gm37466-201ENSMUST00000195692 652 ntBASIC11.48□□□□□ -0.57
Hps1O08983 Gm42627-201ENSMUST00000197347 224 ntBASIC11.48□□□□□ -0.57
Hps1O08983 Gm18056-201ENSMUST00000207670 568 ntBASIC11.48□□□□□ -0.57
Hps1O08983 Gm18061-201ENSMUST00000208350 562 ntBASIC11.48□□□□□ -0.57
Hps1O08983 Gm18063-201ENSMUST00000208529 568 ntBASIC11.48□□□□□ -0.57
Hps1O08983 Gm18052-201ENSMUST00000208750 559 ntBASIC11.48□□□□□ -0.57
Hps1O08983 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Hps1O08983 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hps1O08983 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.48□□□□□ -0.57
Hps1O08983 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hps1O08983 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hps1O08983 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hps1O08983 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hps1O08983 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hps1O08983 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hps1O08983 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hps1O08983 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hps1O08983 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hps1O08983 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hps1O08983 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hps1O08983 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.47□□□□□ -0.57
Hps1O08983 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hps1O08983 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hps1O08983 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hps1O08983 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hps1O08983 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms