Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf11bO08712 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf11bO08712 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Tnfrsf11bO08712 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf11bO08712 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf11bO08712 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf11bO08712 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf11bO08712 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf11bO08712 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf11bO08712 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf11bO08712 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf11bO08712 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf11bO08712 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Gm24830-201ENSMUST00000102024 166 ntBASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Gm14660-201ENSMUST00000119809 575 ntBASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Gm26232-201ENSMUST00000083360 166 ntBASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tnfrsf11bO08712 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfrsf11bO08712 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfrsf11bO08712 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfrsf11bO08712 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Tnfrsf11bO08712 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfrsf11bO08712 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Tnfrsf11bO08712 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Tnfrsf11bO08712 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfrsf11bO08712 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.46□□□□□ -0.41
Tnfrsf11bO08712 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Tnfrsf11bO08712 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms