Protein–RNA interactions for Protein: J3QPX5

Gm8888, Predicted gene 8888, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8888J3QPX5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm8888J3QPX5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm8888J3QPX5 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm8888J3QPX5 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm8888J3QPX5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm8888J3QPX5 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Gm8888J3QPX5 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm8888J3QPX5 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.02□□□□□ -0.64
Gm8888J3QPX5 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm8888J3QPX5 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Gm8888J3QPX5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm8888J3QPX5 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Gm8888J3QPX5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Gm27023-201ENSMUST00000182372 285 ntBASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Gm8602-201ENSMUST00000184045 607 ntBASIC11.02□□□□□ -0.65
Gm8888J3QPX5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Gm35960-201ENSMUST00000202712 767 ntBASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Map1b-203ENSMUST00000223725 2669 ntBASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Gm8888J3QPX5 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Gm13736-201ENSMUST00000119272 253 ntBASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Gm3890-201ENSMUST00000182416 207 ntBASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm8888J3QPX5 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms