Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NpcdF8VQB8 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NpcdF8VQB8 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NpcdF8VQB8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NpcdF8VQB8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NpcdF8VQB8 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NpcdF8VQB8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
NpcdF8VQB8 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NpcdF8VQB8 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NpcdF8VQB8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Gm12857-201ENSMUST00000117678 592 ntBASIC14.83□□□□□ -0.04
NpcdF8VQB8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Gm37299-201ENSMUST00000193951 826 ntBASIC14.83□□□□□ -0.04
NpcdF8VQB8 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.83□□□□□ -0.04
NpcdF8VQB8 Gm5455-201ENSMUST00000058710 715 ntBASIC14.83□□□□□ -0.04
NpcdF8VQB8 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.83□□□□□ -0.04
NpcdF8VQB8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NpcdF8VQB8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.82□□□□□ -0.04
NpcdF8VQB8 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Gm43692-201ENSMUST00000198236 1062 ntBASIC14.82□□□□□ -0.04
NpcdF8VQB8 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.82□□□□□ -0.04
NpcdF8VQB8 AC140375.1-201ENSMUST00000225421 694 ntBASIC14.82□□□□□ -0.04
NpcdF8VQB8 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.82□□□□□ -0.04
NpcdF8VQB8 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NpcdF8VQB8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.81□□□□□ -0.04
NpcdF8VQB8 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NpcdF8VQB8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gm14219-201ENSMUST00000120414 288 ntBASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Mir1956-201ENSMUST00000157748 65 ntBASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gm44980-201ENSMUST00000205826 314 ntBASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gm4157-201ENSMUST00000211647 679 ntBASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gm9111-201ENSMUST00000219394 709 ntBASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms