Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 AY702102-202ENSMUST00000194651 1173 ntBASIC12.65□□□□□ -0.38
Atf6F6VAN0 Gm44958-201ENSMUST00000203734 736 ntBASIC12.65□□□□□ -0.38
Atf6F6VAN0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.65□□□□□ -0.38
Atf6F6VAN0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Atf6F6VAN0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Atf6F6VAN0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Atf6F6VAN0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Atf6F6VAN0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Atf6F6VAN0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.64□□□□□ -0.39
Atf6F6VAN0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.64□□□□□ -0.39
Atf6F6VAN0 Gm10434-201ENSMUST00000101158 471 ntBASIC12.64□□□□□ -0.39
Atf6F6VAN0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Gm14127-201ENSMUST00000117906 678 ntBASIC12.64□□□□□ -0.39
Atf6F6VAN0 Gm12058-201ENSMUST00000118614 437 ntBASIC12.64□□□□□ -0.39
Atf6F6VAN0 Gm4986-201ENSMUST00000119731 549 ntBASIC12.64□□□□□ -0.39
Atf6F6VAN0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.64□□□□□ -0.39
Atf6F6VAN0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Atf6F6VAN0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Gm21156-201ENSMUST00000189693 869 ntBASIC12.64□□□□□ -0.39
Atf6F6VAN0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.64□□□□□ -0.39
Atf6F6VAN0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.64□□□□□ -0.39
Atf6F6VAN0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.64□□□□□ -0.39
Atf6F6VAN0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Atf6F6VAN0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.64□□□□□ -0.39
Atf6F6VAN0 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.63□□□□□ -0.39
Atf6F6VAN0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atf6F6VAN0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.63□□□□□ -0.39
Atf6F6VAN0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.63□□□□□ -0.39
Atf6F6VAN0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.63□□□□□ -0.39
Atf6F6VAN0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.63□□□□□ -0.39
Atf6F6VAN0 Gm11793-201ENSMUST00000120433 981 ntBASIC12.63□□□□□ -0.39
Atf6F6VAN0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atf6F6VAN0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Gm2546-201ENSMUST00000182630 991 ntBASIC12.63□□□□□ -0.39
Atf6F6VAN0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Gm27390-201ENSMUST00000184516 176 ntBASIC12.63□□□□□ -0.39
Atf6F6VAN0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Gm19309-201ENSMUST00000218295 205 ntBASIC12.63□□□□□ -0.39
Atf6F6VAN0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Atf6F6VAN0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms