Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Gm14247-201ENSMUST00000120950 237 ntBASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Gm37666-201ENSMUST00000194110 866 ntBASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Gm43947-201ENSMUST00000203019 959 ntBASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tmf1B9EKI3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Gm20633-201ENSMUST00000176742 2831 ntBASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Gm7722-201ENSMUST00000120646 741 ntBASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Gm45433-201ENSMUST00000209386 247 ntBASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC16.63■□□□□ 0.25
Tmf1B9EKI3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmf1B9EKI3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Gm5616-201ENSMUST00000165252 384 ntBASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Gm8741-201ENSMUST00000174736 384 ntBASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Gm43962-201ENSMUST00000203898 190 ntBASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tmf1B9EKI3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Gm14208-201ENSMUST00000119645 678 ntBASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Gm12566-201ENSMUST00000121479 359 ntBASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Gm12164-201ENSMUST00000121695 551 ntBASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Gm24749-201ENSMUST00000157838 343 ntBASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Gm7003-201ENSMUST00000195089 312 ntBASIC16.61■□□□□ 0.25
Tmf1B9EKI3 AU022133-201ENSMUST00000200601 873 ntBASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.61■□□□□ 0.25
Tmf1B9EKI3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms