Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC9.9□□□□□ -0.82
Chd6A3KFM7 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Chd6A3KFM7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Chd6A3KFM7 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Chd6A3KFM7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Chd6A3KFM7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Chd6A3KFM7 Gm6755-201ENSMUST00000100598 864 ntBASIC9.9□□□□□ -0.83
Chd6A3KFM7 Gm6740-201ENSMUST00000100617 864 ntBASIC9.9□□□□□ -0.83
Chd6A3KFM7 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Chd6A3KFM7 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Chd6A3KFM7 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Chd6A3KFM7 Gm28833-201ENSMUST00000189671 559 ntBASIC9.9□□□□□ -0.83
Chd6A3KFM7 Gm8226-201ENSMUST00000190511 798 ntBASIC9.9□□□□□ -0.83
Chd6A3KFM7 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC9.9□□□□□ -0.83
Chd6A3KFM7 Gm7939-201ENSMUST00000201233 1050 ntBASIC9.9□□□□□ -0.83
Chd6A3KFM7 BC080696-201ENSMUST00000202858 1218 ntBASIC9.9□□□□□ -0.83
Chd6A3KFM7 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC9.9□□□□□ -0.83
Chd6A3KFM7 AC154477.1-201ENSMUST00000226515 773 ntBASIC9.9□□□□□ -0.83
Chd6A3KFM7 AC169511.1-201ENSMUST00000227639 995 ntBASIC9.9□□□□□ -0.83
Chd6A3KFM7 AC137842.2-201ENSMUST00000227734 797 ntBASIC9.9□□□□□ -0.83
Chd6A3KFM7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Chd6A3KFM7 Gm4978-201ENSMUST00000071565 801 ntBASIC9.9□□□□□ -0.83
Chd6A3KFM7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Chd6A3KFM7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Chd6A3KFM7 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Chd6A3KFM7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gm14921-201ENSMUST00000118643 908 ntBASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gm15196-201ENSMUST00000121406 482 ntBASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC9.89□□□□□ -0.83
Chd6A3KFM7 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gm20493-201ENSMUST00000173706 213 ntBASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC9.89□□□□□ -0.83
Chd6A3KFM7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Mir1190-201ENSMUST00000116925 96 ntBASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gm16441-201ENSMUST00000138176 924 ntBASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gm43249-201ENSMUST00000200464 458 ntBASIC9.89□□□□□ -0.83
Chd6A3KFM7 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC9.89□□□□□ -0.83
Chd6A3KFM7 Gm7082-201ENSMUST00000209880 969 ntBASIC9.89□□□□□ -0.83
Chd6A3KFM7 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chd6A3KFM7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC9.89□□□□□ -0.83
Chd6A3KFM7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Gm12418-201ENSMUST00000118116 942 ntBASIC9.88□□□□□ -0.83
Chd6A3KFM7 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC9.88□□□□□ -0.83
Chd6A3KFM7 CT025618.1-201ENSMUST00000227409 1279 ntBASIC9.88□□□□□ -0.83
Chd6A3KFM7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms