Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.83□□□□□ -0.36
Scn1aA2APX8 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Gm12857-201ENSMUST00000117678 592 ntBASIC12.83□□□□□ -0.36
Scn1aA2APX8 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Gm9797-202ENSMUST00000218003 294 ntBASIC12.83□□□□□ -0.36
Scn1aA2APX8 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.83□□□□□ -0.36
Scn1aA2APX8 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.83□□□□□ -0.36
Scn1aA2APX8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.82□□□□□ -0.36
Scn1aA2APX8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.82□□□□□ -0.36
Scn1aA2APX8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Gm22133-201ENSMUST00000102082 109 ntBASIC12.82□□□□□ -0.36
Scn1aA2APX8 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Gm8199-201ENSMUST00000121323 823 ntBASIC12.82□□□□□ -0.36
Scn1aA2APX8 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.82□□□□□ -0.36
Scn1aA2APX8 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.82□□□□□ -0.36
Scn1aA2APX8 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Gm5705-201ENSMUST00000066241 711 ntBASIC12.82□□□□□ -0.36
Scn1aA2APX8 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Scn1aA2APX8 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Scn1aA2APX8 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.81□□□□□ -0.36
Scn1aA2APX8 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.81□□□□□ -0.36
Scn1aA2APX8 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.81□□□□□ -0.36
Scn1aA2APX8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scn1aA2APX8 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms