Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm11400-201ENSMUST00000120853 1214 ntBASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm5354-201ENSMUST00000182417 973 ntBASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm38294-201ENSMUST00000192831 381 ntBASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm9797-201ENSMUST00000052902 613 ntBASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3n-3A0A0G2JEM0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Mir8102-201ENSMUST00000184148 139 ntBASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rn7sk-201ENSMUST00000083103 331 ntBASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm26315-201ENSMUST00000083890 321 ntBASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms