Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.22□□□□□ -0.93
Trav6n-6A0A075B6B2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav6n-6A0A075B6B2 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav6n-6A0A075B6B2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm13612-201ENSMUST00000119276 390 ntBASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm11814-201ENSMUST00000119515 929 ntBASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm11400-201ENSMUST00000120853 1214 ntBASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm9630-201ENSMUST00000178304 885 ntBASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm44799-201ENSMUST00000207639 1202 ntBASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm8227-201ENSMUST00000223306 571 ntBASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 AC154305.4-201ENSMUST00000224520 614 ntBASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 AC169036.1-201ENSMUST00000227994 296 ntBASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav6n-6A0A075B6B2 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm12138-201ENSMUST00000122180 951 ntBASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm9124-201ENSMUST00000191789 1092 ntBASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm9113-201ENSMUST00000192510 1018 ntBASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm9131-201ENSMUST00000193557 1089 ntBASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm9121-201ENSMUST00000193749 1071 ntBASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms