Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Gm16296-201ENSMUST00000159905 325 ntBASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Gm7029-201ENSMUST00000173226 450 ntBASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Gm44124-201ENSMUST00000204159 472 ntBASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Gm10268-201ENSMUST00000085340 555 ntBASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5-4A0A075B652 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Trav5-4A0A075B652 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms