Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcb1Q9Z0H3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Gm43184-201ENSMUST00000197247 542 ntBASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcb1Q9Z0H3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcb1Q9Z0H3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.77□□□□□ -0.36
Smarcb1Q9Z0H3 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.77□□□□□ -0.36
Smarcb1Q9Z0H3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcb1Q9Z0H3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcb1Q9Z0H3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcb1Q9Z0H3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcb1Q9Z0H3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcb1Q9Z0H3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Gm8343-201ENSMUST00000182705 994 ntBASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Gm37986-201ENSMUST00000193285 383 ntBASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Gm7848-201ENSMUST00000210739 718 ntBASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms