Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ClcnkaQ9WUB7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
ClcnkaQ9WUB7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
ClcnkaQ9WUB7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
ClcnkaQ9WUB7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
ClcnkaQ9WUB7 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
ClcnkaQ9WUB7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Gm8018-201ENSMUST00000173536 789 ntBASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Gm27572-201ENSMUST00000183702 255 ntBASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Gm43133-201ENSMUST00000197472 463 ntBASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Gm44405-201ENSMUST00000198952 126 ntBASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Gm45930-201ENSMUST00000221330 292 ntBASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
ClcnkaQ9WUB7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Gm17420-201ENSMUST00000164753 153 ntBASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Gm19309-201ENSMUST00000218295 205 ntBASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms