Protein–RNA interactions for Protein: Q9WU72

Tnfsf13b, Tumor necrosis factor ligand superfamily member 13B, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf13bQ9WU72 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf13bQ9WU72 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf13bQ9WU72 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Gm18734-201ENSMUST00000172937 808 ntBASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf13bQ9WU72 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Gm5419-201ENSMUST00000119301 527 ntBASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.28□□□□□ -0.28
Tnfsf13bQ9WU72 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf13bQ9WU72 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Tnfsf13bQ9WU72 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.27□□□□□ -0.28
Tnfsf13bQ9WU72 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf13bQ9WU72 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf13bQ9WU72 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf13bQ9WU72 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf13bQ9WU72 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf13bQ9WU72 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf13bQ9WU72 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf13bQ9WU72 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf13bQ9WU72 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Gm15515-201ENSMUST00000117827 822 ntBASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Gm12566-201ENSMUST00000121479 359 ntBASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Mir6979-201ENSMUST00000183927 56 ntBASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Mir7677-201ENSMUST00000184226 67 ntBASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Gm7848-201ENSMUST00000210739 718 ntBASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf13bQ9WU72 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms