Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Gm12857-201ENSMUST00000117678 592 ntBASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Gm25881-201ENSMUST00000157783 103 ntBASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn8aQ9WTU3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Gm23699-201ENSMUST00000158835 135 ntBASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Gm3786-201ENSMUST00000202659 378 ntBASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Gm11941-201ENSMUST00000119904 610 ntBASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Gm38117-201ENSMUST00000194653 939 ntBASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn8aQ9WTU3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms