Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh17Q9R100 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh17Q9R100 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh17Q9R100 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12□□□□□ -0.49
Cdh17Q9R100 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh17Q9R100 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cdh17Q9R100 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh17Q9R100 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12□□□□□ -0.49
Cdh17Q9R100 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh17Q9R100 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh17Q9R100 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh17Q9R100 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.99□□□□□ -0.49
Cdh17Q9R100 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Gm24830-201ENSMUST00000102024 166 ntBASIC11.99□□□□□ -0.49
Cdh17Q9R100 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Snora73a-201ENSMUST00000082453 205 ntBASIC11.99□□□□□ -0.49
Cdh17Q9R100 Gm26232-201ENSMUST00000083360 166 ntBASIC11.99□□□□□ -0.49
Cdh17Q9R100 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.99□□□□□ -0.49
Cdh17Q9R100 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Cog3-203ENSMUST00000227473 4197 ntBASIC11.99□□□□□ -0.49
Cdh17Q9R100 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.99□□□□□ -0.49
Cdh17Q9R100 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh17Q9R100 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Gm16379-201ENSMUST00000161469 348 ntBASIC11.98□□□□□ -0.49
Cdh17Q9R100 Gm8762-201ENSMUST00000193486 339 ntBASIC11.98□□□□□ -0.49
Cdh17Q9R100 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdh17Q9R100 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh17Q9R100 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh17Q9R100 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh17Q9R100 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Cdh17Q9R100 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms