Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC14.38□□□□□ -0.11
Scn11aQ9R053 Gm6114-201ENSMUST00000182472 968 ntBASIC14.38□□□□□ -0.11
Scn11aQ9R053 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 CT009489.1-201ENSMUST00000227740 1893 ntBASIC14.38□□□□□ -0.11
Scn11aQ9R053 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn11aQ9R053 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.37□□□□□ -0.11
Scn11aQ9R053 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Gm11451-201ENSMUST00000118946 630 ntBASIC14.37□□□□□ -0.11
Scn11aQ9R053 Gm13668-201ENSMUST00000119237 1001 ntBASIC14.37□□□□□ -0.11
Scn11aQ9R053 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scn11aQ9R053 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.37□□□□□ -0.11
Scn11aQ9R053 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Gm22920-201ENSMUST00000102175 109 ntBASIC14.37□□□□□ -0.11
Scn11aQ9R053 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.37□□□□□ -0.11
Scn11aQ9R053 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.37□□□□□ -0.11
Scn11aQ9R053 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Scn11aQ9R053 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.36□□□□□ -0.11
Scn11aQ9R053 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.36□□□□□ -0.11
Scn11aQ9R053 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Gm13937-201ENSMUST00000121000 988 ntBASIC14.36□□□□□ -0.11
Scn11aQ9R053 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC14.36□□□□□ -0.11
Scn11aQ9R053 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn11aQ9R053 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn11aQ9R053 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn11aQ9R053 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.36□□□□□ -0.11
Scn11aQ9R053 CT025602.2-201ENSMUST00000226553 772 ntBASIC14.36□□□□□ -0.11
Scn11aQ9R053 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scn11aQ9R053 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn11aQ9R053 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.35□□□□□ -0.11
Scn11aQ9R053 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.35□□□□□ -0.11
Scn11aQ9R053 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn11aQ9R053 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.35□□□□□ -0.11
Scn11aQ9R053 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn11aQ9R053 Gm24891-201ENSMUST00000104391 136 ntBASIC14.35□□□□□ -0.11
Scn11aQ9R053 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC14.35□□□□□ -0.11
Scn11aQ9R053 Gm11980-201ENSMUST00000121445 986 ntBASIC14.35□□□□□ -0.11
Scn11aQ9R053 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC14.35□□□□□ -0.11
Scn11aQ9R053 Gm4862-201ENSMUST00000170405 438 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms