Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Gm14127-201ENSMUST00000117906 678 ntBASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Gm13689-201ENSMUST00000119360 685 ntBASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Gm27430-201ENSMUST00000184585 107 ntBASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Gm44333-201ENSMUST00000197168 107 ntBASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Gm9063-201ENSMUST00000223299 582 ntBASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Itm2b-204ENSMUST00000228637 783 ntBASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rnf4Q9QZS2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Gm15371-201ENSMUST00000117057 784 ntBASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Gm5687-201ENSMUST00000118252 640 ntBASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Gm23363-201ENSMUST00000175024 79 ntBASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.43□□□□□ -0.42
Rnf4Q9QZS2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms