Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Phtf1Q9QZ09 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Phtf1Q9QZ09 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Phtf1Q9QZ09 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Phtf1Q9QZ09 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Phtf1Q9QZ09 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Phtf1Q9QZ09 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Phtf1Q9QZ09 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Phtf1Q9QZ09 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Phtf1Q9QZ09 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Phtf1Q9QZ09 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm15808-201ENSMUST00000119046 604 ntBASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Phtf1Q9QZ09 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Mir877-201ENSMUST00000104738 85 ntBASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Phtf1Q9QZ09 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms