Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ldb3Q9JKS4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Gm13323-201ENSMUST00000120245 1151 ntBASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Gm27390-201ENSMUST00000184516 176 ntBASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Gm43438-201ENSMUST00000198133 379 ntBASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Gm44364-201ENSMUST00000198368 141 ntBASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Gm9996-201ENSMUST00000070359 913 ntBASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ldb3Q9JKS4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Gm24255-201ENSMUST00000104481 128 ntBASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Gm3096-201ENSMUST00000185770 364 ntBASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Gm8885-201ENSMUST00000189382 598 ntBASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Gm37259-201ENSMUST00000193903 849 ntBASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Olfr582-201ENSMUST00000098212 960 ntBASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ldb3Q9JKS4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms