Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Gm22920-201ENSMUST00000102175 109 ntBASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Gm14193-201ENSMUST00000105067 153 ntBASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Gm8531-201ENSMUST00000188319 893 ntBASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Gm25063-201ENSMUST00000104666 94 ntBASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Gm8731-201ENSMUST00000118088 412 ntBASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Gm11836-201ENSMUST00000121022 441 ntBASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Gm3619-201ENSMUST00000219947 775 ntBASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-4Q9EQM3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm25076-201ENSMUST00000104098 132 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm12579-201ENSMUST00000118040 783 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm24398-201ENSMUST00000157870 109 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm21092-201ENSMUST00000178995 955 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm3551-201ENSMUST00000190750 664 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm5100-201ENSMUST00000195631 589 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm44158-201ENSMUST00000203881 505 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm8956-201ENSMUST00000203939 825 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm18463-201ENSMUST00000207258 474 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm18059-201ENSMUST00000208073 580 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm6722-201ENSMUST00000221586 390 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms