Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Gm13453-201ENSMUST00000118708 357 ntBASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Gm15376-201ENSMUST00000122258 783 ntBASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Gm27321-201ENSMUST00000185021 205 ntBASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps33aQ9D2N9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Gm5124-202ENSMUST00000132683 2083 ntBASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Gm27618-201ENSMUST00000183671 60 ntBASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Gm43094-201ENSMUST00000196549 921 ntBASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Gm6458-201ENSMUST00000211573 635 ntBASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Gm37954-201ENSMUST00000195400 2071 ntBASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.03□□□□□ -0.32
Vps33aQ9D2N9 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps33aQ9D2N9 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps33aQ9D2N9 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps33aQ9D2N9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.02□□□□□ -0.32
Vps33aQ9D2N9 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps33aQ9D2N9 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vps33aQ9D2N9 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps33aQ9D2N9 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps33aQ9D2N9 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.02□□□□□ -0.32
Vps33aQ9D2N9 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Vps33aQ9D2N9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms