Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.65□□□□□ -0.38
Vps28Q9D1C8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Gm4857-201ENSMUST00000192718 785 ntBASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Gm10312-201ENSMUST00000078515 489 ntBASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps28Q9D1C8 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vps28Q9D1C8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vps28Q9D1C8 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Vps28Q9D1C8 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vps28Q9D1C8 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Vps28Q9D1C8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Gm14832-201ENSMUST00000121289 322 ntBASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Gm24845-201ENSMUST00000158034 109 ntBASIC12.64□□□□□ -0.39
Vps28Q9D1C8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps28Q9D1C8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Gm14109-201ENSMUST00000118814 309 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms