Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm10478-201ENSMUST00000084451 396 ntBASIC12.97□□□□□ -0.33
Ddx56Q9D0R4 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ddx56Q9D0R4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx56Q9D0R4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx56Q9D0R4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx56Q9D0R4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx56Q9D0R4 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx56Q9D0R4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.97□□□□□ -0.33
Ddx56Q9D0R4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx56Q9D0R4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx56Q9D0R4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx56Q9D0R4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ddx56Q9D0R4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx56Q9D0R4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx56Q9D0R4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Gm29396-201ENSMUST00000185659 716 ntBASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Gm42599-201ENSMUST00000201308 469 ntBASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Olfr284-202ENSMUST00000206647 966 ntBASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Gm10608-202ENSMUST00000213924 676 ntBASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx56Q9D0R4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ddx56Q9D0R4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx56Q9D0R4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Ddx56Q9D0R4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx56Q9D0R4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
Ddx56Q9D0R4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx56Q9D0R4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx56Q9D0R4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx56Q9D0R4 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx56Q9D0R4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.96□□□□□ -0.34
Ddx56Q9D0R4 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx56Q9D0R4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx56Q9D0R4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Ddx56Q9D0R4 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Matn2-203ENSMUST00000226766 3252 ntBASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm24830-201ENSMUST00000102024 166 ntBASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm24934-201ENSMUST00000103764 111 ntBASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm4986-201ENSMUST00000119731 549 ntBASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm28882-201ENSMUST00000185504 314 ntBASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm37489-201ENSMUST00000191883 159 ntBASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm6013-201ENSMUST00000212264 699 ntBASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm5950-201ENSMUST00000213337 772 ntBASIC12.95□□□□□ -0.34
Ddx56Q9D0R4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 145 ms