Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Gm22121-201ENSMUST00000175148 54 ntBASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Mir7654-201ENSMUST00000185082 70 ntBASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Krt88Q9CPR6 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Gm8805-201ENSMUST00000117848 313 ntBASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Gm44882-201ENSMUST00000205702 802 ntBASIC11.1□□□□□ -0.63
Krt88Q9CPR6 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Rgr-203ENSMUST00000225070 4704 ntBASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt88Q9CPR6 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms