Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Gm27514-201ENSMUST00000183692 110 ntBASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.03□□□□□ -0.16
Trim11Q99PQ2 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Gm12058-201ENSMUST00000118614 437 ntBASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Gm5370-201ENSMUST00000187187 574 ntBASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim11Q99PQ2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim11Q99PQ2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Mir1247-201ENSMUST00000116706 82 ntBASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Gm11425-201ENSMUST00000119608 498 ntBASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Gm37201-201ENSMUST00000191845 523 ntBASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Gm37008-201ENSMUST00000195712 319 ntBASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms