Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Gm23604-201ENSMUST00000104311 132 ntBASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Mir3060-201ENSMUST00000175339 83 ntBASIC12.19□□□□□ -0.46
Cdh23Q99PF4 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Gm38007-201ENSMUST00000192187 313 ntBASIC12.19□□□□□ -0.46
Cdh23Q99PF4 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Gm12337-201ENSMUST00000119634 400 ntBASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Gm13445-201ENSMUST00000121664 307 ntBASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Gm4868-201ENSMUST00000164138 789 ntBASIC12.19□□□□□ -0.46
Cdh23Q99PF4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh23Q99PF4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Gm23612-201ENSMUST00000103823 110 ntBASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Gm13204-201ENSMUST00000120110 821 ntBASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Gm23576-201ENSMUST00000179918 110 ntBASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Gm8181-201ENSMUST00000062242 669 ntBASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Gm9673-201ENSMUST00000119287 781 ntBASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Gm16459-201ENSMUST00000121443 686 ntBASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms