Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Gm43184-201ENSMUST00000197247 542 ntBASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Gm25880-201ENSMUST00000104331 132 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Gm13047-201ENSMUST00000117116 815 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Gm8100-201ENSMUST00000182906 988 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Gm2517-201ENSMUST00000215651 348 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Gm25517-201ENSMUST00000083865 134 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Gm10288-201ENSMUST00000084614 537 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx6-1Q99MA9 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Nkx6-1Q99MA9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms