Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Scrt1Q99M85 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scrt1Q99M85 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.84□□□□□ -0.67
Scrt1Q99M85 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.84□□□□□ -0.67
Scrt1Q99M85 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gm13736-201ENSMUST00000119272 253 ntBASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gm11667-201ENSMUST00000119828 486 ntBASIC10.84□□□□□ -0.67
Scrt1Q99M85 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gm37666-201ENSMUST00000194110 866 ntBASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Rprl1-202ENSMUST00000198476 238 ntBASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gm17812-201ENSMUST00000204935 318 ntBASIC10.84□□□□□ -0.67
Scrt1Q99M85 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.84□□□□□ -0.67
Scrt1Q99M85 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.84□□□□□ -0.67
Scrt1Q99M85 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Scrt1Q99M85 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Scrt1Q99M85 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Scrt1Q99M85 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Gm13492-201ENSMUST00000119772 665 ntBASIC10.83□□□□□ -0.68
Scrt1Q99M85 Gm13408-201ENSMUST00000119822 798 ntBASIC10.83□□□□□ -0.68
Scrt1Q99M85 Gm12266-201ENSMUST00000120311 962 ntBASIC10.83□□□□□ -0.68
Scrt1Q99M85 Gm13935-201ENSMUST00000121859 798 ntBASIC10.83□□□□□ -0.68
Scrt1Q99M85 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms