Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.9□□□□□ -0.5
Rab28Q99KL7 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.9□□□□□ -0.5
Rab28Q99KL7 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Gm44967-201ENSMUST00000207047 631 ntBASIC11.9□□□□□ -0.5
Rab28Q99KL7 Gm45598-202ENSMUST00000210719 986 ntBASIC11.9□□□□□ -0.5
Rab28Q99KL7 Gm9257-201ENSMUST00000221254 232 ntBASIC11.9□□□□□ -0.5
Rab28Q99KL7 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.9□□□□□ -0.5
Rab28Q99KL7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.9□□□□□ -0.5
Rab28Q99KL7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rab28Q99KL7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.9□□□□□ -0.5
Rab28Q99KL7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rab28Q99KL7 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.89□□□□□ -0.51
Rab28Q99KL7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Gm18711-201ENSMUST00000199341 750 ntBASIC11.89□□□□□ -0.51
Rab28Q99KL7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.89□□□□□ -0.51
Rab28Q99KL7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab28Q99KL7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Mir877-201ENSMUST00000104738 85 ntBASIC11.88□□□□□ -0.51
Rab28Q99KL7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.88□□□□□ -0.51
Rab28Q99KL7 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.88□□□□□ -0.51
Rab28Q99KL7 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.88□□□□□ -0.51
Rab28Q99KL7 Gm32999-201ENSMUST00000192693 562 ntBASIC11.88□□□□□ -0.51
Rab28Q99KL7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.88□□□□□ -0.51
Rab28Q99KL7 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.88□□□□□ -0.51
Rab28Q99KL7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms