Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdha8Q91Y12 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Gm22018-201ENSMUST00000104357 131 ntBASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Mir1247-201ENSMUST00000116706 82 ntBASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Gm6023-201ENSMUST00000118217 606 ntBASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Gm37424-201ENSMUST00000191727 561 ntBASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 AY702102-202ENSMUST00000194651 1173 ntBASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Gm19184-201ENSMUST00000196798 928 ntBASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha8Q91Y12 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gm5187-201ENSMUST00000117317 991 ntBASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gm13315-201ENSMUST00000120376 991 ntBASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha8Q91Y12 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Gm5053-201ENSMUST00000208361 1678 ntBASIC12□□□□□ -0.49
Pcdha8Q91Y12 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms